The detailed information of tRNA gene sequence


Sequence ID>W1910731839
Genome IDMHFJ01000060
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RIFCSPHIGHO2_02_FULL_63_14 [MHFJ]
Start position on genome 14380
End posion on genome 14287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacactattt
tRNA gene sequence 
GGAGAGGTGCCGGAGATGGCCGATCGGAATCGCCTGCTAAGCGATTAGCCTGCCACAAGC
GGGCTCCTGGGTTCGAATCCCAGCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttagcc
Secondary structure (Cloverleaf model)
>W1910731839	Ser	GCT
                   t      GCCA ttttttagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
    T A G A        G      | | | | |     G
  G         G G C C       C T G G G     C
  G         + | | |                 T T
  C         T C G G
    C G A          A     TAGCCTGCCACAAGCGGGCTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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