The detailed information of tRNA gene sequence


Sequence ID>W1910731947
Genome IDMHFM01000062
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10b [MHFM]
Start position on genome 6277
End posion on genome 6368
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgctcattta
tRNA gene sequence 
GGAGAGGTCGCATAGCCCGGCCTAGTGCGCTCGCTTGGAAAGCGAGTAGACCGTAATTGG
TCTCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcccgaa
Secondary structure (Cloverleaf model)
>W1910731947	Ser	GGA
                   a      GCCA ttttcccgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C C G A        C      | | | | |     A
  C         T A C G       C A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TAGACCGTAATTGGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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