The detailed information of tRNA gene sequence


Sequence ID>W1910732005
Genome IDMHFO01000044
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RIFCSPLOWO2_01_FULL_50_24 [MHFO]
Start position on genome 20414
End posion on genome 20325
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gataaaacgc
tRNA gene sequence 
GGAAAGGTGCCGGAGCGGCCGAACGGGCGCGCTTGGAAAGCGCGTAGACTCGCAAGGGTC
TCCAGGGTTCGAATCCCTGCCTTTCCGCCA
Downstream region at tRNA end position 
ttgttgacgc
Secondary structure (Cloverleaf model)
>W1910732005	Ser	GGA
                   c      GCCA ttgttgacgc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TAGACTCGCAAGGGTCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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