The detailed information of tRNA gene sequence


Sequence ID>W1910733592
Genome IDMHIU01000018
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Colwellbacteria bacterium RIFCSPHIGHO2_02_FULL_43_15 [MHIU]
Start position on genome 6623
End posion on genome 6710
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcgagacaa
tRNA gene sequence 
GGAAGCGTGGCTGAGTGGTTTAAAGCAGCATCCTGCTAAGATGTTGTACCCGCAAGGGTA
CCGAAGGTTCGAATCCTTCCGCTTCCGCat
Downstream region at tRNA end position 
cgctcgatat
Secondary structure (Cloverleaf model)
>W1910733592	Ser	GCT
                   a      GCat cgctcgatat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A A G G     C
    G         | | |                 T T
    T       A A G C
      T T A        A     TGTACCCGCAAGGGTACC
                    G + T
                    C - G
                    A - T
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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