The detailed information of tRNA gene sequence


Sequence ID>W1910733629
Genome IDMHIV01000033
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Colwellbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17 [MHIV]
Start position on genome 12468
End posion on genome 12558
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggtcatgagt
tRNA gene sequence 
GGTGAGGTACTCAAGTGGTCGAAGAGGGGAGTTTGCTAAACTCCTAGGTCGGAGCAATCC
GGCGCGAGGGTTCGAATCCCTCCCTCACCGCag
Downstream region at tRNA end position 
ggggatatga
Secondary structure (Cloverleaf model)
>W1910733629	Ser	GCT
                   t      GCag ggggatatga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      C G A        G     TAGGTCGGAGCAATCCGGCGC
                    G - C
                    G - C
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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