The detailed information of tRNA gene sequence


Sequence ID>W1910733716
Genome IDMHIY01000012
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Colwellbacteria bacterium RIFCSPLOWO2_01_FULL_48_10 [MHIY]
Start position on genome 31078
End posion on genome 30989
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatgagtttt
tRNA gene sequence 
GGAGGCGTGGCTGAGTGGCCGAAAGCGGCAGGTTGCTAACTTGTTAGGGAGGTAAAACTC
CCTCGAAGGTTCGAATCCTTCCGCCTCCGCaa
Downstream region at tRNA end position 
attagattag
Secondary structure (Cloverleaf model)
>W1910733716	Ser	GCT
                   t      GCaa attagattag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A A G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TAGGGAGGTAAAACTCCCTC
                    G + T
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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