The detailed information of tRNA gene sequence


Sequence ID>W1910738318
Genome IDMHQJ01000051
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_49_12 [MHQJ]
Start position on genome 12844
End posion on genome 12753
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taagcccgaa
tRNA gene sequence 
GGAGGAGTGCCGGAGCCTGGCTGAACGGAGCATCCTGCTAAGATGTTGATCCCGCAAGGG
GTCCGTGGGTTCAAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
gattggcaac
Secondary structure (Cloverleaf model)
>W1910738318	Ser	GCT
                   a      GCCA gattggcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  T         G G C C       G T G G G     C
  G           | | |                 T T
  G         A C G G
    C T G A        A     TGATCCCGCAAGGGGTCC
                    G + T
                    C - G
                    A - T
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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