The detailed information of tRNA gene sequence


Sequence ID>W1910738583
Genome IDMHQS01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_59_16 [MHQS]
Start position on genome 148
End posion on genome 61
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgtagcga
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCACCGCCTTGGAAAGGCGGCATGCCTGAAAGGGCA
TCGCGAGTTCGAATCTCGCCCTCTCCGCaa
Downstream region at tRNA end position 
attttcgaaa
Secondary structure (Cloverleaf model)
>W1910738583	Ser	GGA
                   a      GCaa attttcgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CATGCCTGAAAGGGCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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