The detailed information of tRNA gene sequence


Sequence ID>W1910743348
Genome IDMHYQ01000106
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium RIFCSPHIGHO2_02_FULL_40_12 [MHYQ]
Start position on genome 11273
End posion on genome 11199
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcgttggga
tRNA gene sequence 
CGCGGGGTAGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACtc
Downstream region at tRNA end position 
tttacacata
Secondary structure (Cloverleaf model)
>W1910743348	Met	CAT
                   a      ACtc tttacacata
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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