The detailed information of tRNA gene sequence


Sequence ID>W1910744381
Genome IDMIAM01000015
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 [MIAM]
Start position on genome 32271
End posion on genome 32195
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaccagtagt
tRNA gene sequence 
CGGGGAGTAGCGCAGCCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ctgacaaaaa
Secondary structure (Cloverleaf model)
>W1910744381	Pro	TGG
                   t      ACCA ctgacaaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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