The detailed information of tRNA gene sequence


Sequence ID>W1910744772
Genome IDMIDI01000233
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio sp. RBG_19FT_COMBO_42_12 [MIDI]
Start position on genome 3494
End posion on genome 3402
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttgtttaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCGAAGGCAGCCGCCTGCTAAGCGGTTGTGGGGGTAAAACT
TCACCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
gtaactacgg
Secondary structure (Cloverleaf model)
>W1910744772	Ser	GCT
                   a      GCCA gtaactacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       C A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          A     TGTGGGGGTAAAACTTCACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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