The detailed information of tRNA gene sequence


Sequence ID>W1910744813
Genome IDMIDR01000161
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 [MIDR]
Start position on genome 2508
End posion on genome 2418
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactgcttaa
tRNA gene sequence 
GGAAAGATGGCTGAGTGGCTGAAGGCACGTCCCTGCTAAGGACGCGTACTCACTAAAATG
GGTACCGAGGGTTCAAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
tttttttcgt
Secondary structure (Cloverleaf model)
>W1910744813	Ser	GCT
                   a      Gttt tttttttcgt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        A     CGTACTCACTAAAATGGGTACC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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