The detailed information of tRNA gene sequence


Sequence ID>W1910744822
Genome IDMIDS01000128
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8 [MIDS]
Start position on genome 2326
End posion on genome 2417
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctcgttttc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTTAAGGCAGCGGTTTGCTAAACCGTTGATGGGGTTAAACCC
ATCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gccttcgcca
Secondary structure (Cloverleaf model)
>W1910744822	Ser	GCT
                   c      GCCA gccttcgcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     TGATGGGGTTAAACCCATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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