The detailed information of tRNA gene sequence


Sequence ID>W1910749512
Genome IDMJCD01000014
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi HLS1 [MJCD]
Start position on genome 13643
End posion on genome 13558
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aggagtgcac
tRNA gene sequence 
GCAGGGATAGCCAAGTCAGGCCAACGGCGCAGCGTTCAGGGCGCTGTCCTGTAGAGGTCC
GCAGGTTCAAATCCTGCTCCCTGCACtc
Downstream region at tRNA end position 
cgttttcact
Secondary structure (Cloverleaf model)
>W1910749512	Leu	CAG
                   c      ACtc cgttttcact
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  A         A C C G       G C A G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCTGTAGAGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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