The detailed information of tRNA gene sequence


Sequence ID>W1910749517
Genome IDMJCD01000037
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi HLS1 [MJCD]
Start position on genome 5965
End posion on genome 6046
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctcagaccga
tRNA gene sequence 
GCCAGGATGGCCGAGTGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCTTCTGGGATCGGG
GGTTCAAATCCCTCTCCTGGCGttt
Downstream region at tRNA end position 
ttgttgtcgc
Secondary structure (Cloverleaf model)
>W1910749517	Ser	GGA
                   a      Gttt ttgttgtcgc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      T     G C C G       G G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCTTCTGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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