The detailed information of tRNA gene sequence


Sequence ID>W1910760396
Genome IDMNFA01000062
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon 13_1_40CM_4_48_7 [MNFA]
Start position on genome 28214
End posion on genome 28309
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaggctctgt
tRNA gene sequence 
GGGCCGGTAGTTTAGTCCGGTAGAATACCTGCCTTGCATGCTGGCAACGGCAGAGGAAAC
GTAGGTGGTCGTGGGTTCGAATCCCACCCGGTCCACta
Downstream region at tRNA end position 
catctctgac
Secondary structure (Cloverleaf model)
>W1910760396	Ala	TGC
                   t      ACta catctctgac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     G
    C       T T T G       G T G G G     C
    C       + | | +                 T T
    G       G A A T
      G T A        A     CAACGGCAGAGGAAACGTAGGTGGTC
                    C - G
                    C - G
                    T   T
                    G - C
                    C - G
                  C       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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