The detailed information of tRNA gene sequence


Sequence ID>W1910760508
Genome IDMNJS01000052
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon 13_1_20CM_2_39_20 [MNJS]
Start position on genome 1820
End posion on genome 1746
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cagaaggctT
tRNA gene sequence 
GGATCGGTAGTCTAGTTGGCAGGATGACGCACTCACACTGCGTAGGTCAAGGGTTCAAAT
CCCTTCCGATCCAGtc
Downstream region at tRNA end position 
tatgtttaaa
Secondary structure (Cloverleaf model)
>W1910760508	Val	CAC
                   T      AGtc tatgtttaaa
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T C T G       A A G G G     C
    G       + | | +                 T T
    G       G G A T
      C A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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