The detailed information of tRNA gene sequence


Sequence ID>W1910760515
Genome IDMNJU01000025
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon 13_1_20CM_2_38_5 [MNJU]
Start position on genome 1560
End posion on genome 1635
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cattcacatc
tRNA gene sequence 
GGGATCGTGGTCTAGCTTGGTTAGGATTCGGGCCTTGGGCGCCTGAGGTCGTCGGTTCAA
ATCCGGCCGATCCCACtt
Downstream region at tRNA end position 
ttaatatttt
Secondary structure (Cloverleaf model)
>W1910760515	Pro	TGG
                   c      ACtt ttaatatttt
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     C G G C C     A
    T C G A        G      | + | | |     A
  T         T C T G       G T C G G     C
  G         + | | +                 T T
  G         G G A T
    T T A          T     AGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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