The detailed information of tRNA gene sequence


Sequence ID>C09100396
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1033163
End posion on genome 1033086
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttttgtctta
tRNA gene sequence 
CTGGGTGTAGCTCAGTCTGGCCAGAGTGCCTGGTTCGGATCCAGGAGGCCGCCGGTTCGA
ATCCGGCCACCCAGACCA
Downstream region at tRNA end position 
tttcgcgctt
Secondary structure (Cloverleaf model)
>C09100396	Pro	CGG
                   a      ACCA tttcgcgctt
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     G
  T         C T C G       G C C G G     C
  G         | | | +                 T T
  G         G A G T
    C C A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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