The detailed information of tRNA gene sequence


Sequence ID>C09102622
Genome IDCP001226
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola Dsem [CP001226]
Start position on genome 105248
End posion on genome 105321
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catgcgtgcT
tRNA gene sequence 
CGGAGCATGTTGTAGTGGTAGCATCTTTGGTTTGGGGCCAAAGCGCGAGAGTTCAAGTCC
CTCTGCTCCGATCt
Downstream region at tRNA end position 
agctcaagcg
Secondary structure (Cloverleaf model)
>C09102622	Pro	TGG
                   T      ATCt agctcaagcg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T G
                    T     C T C C C     A
        G A        G      | | |   |     A
      T     T G T T       G A G A G     C
      G     + | |                   T T
      G     G C A T
        T A        C     GCGC
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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