The detailed information of tRNA gene sequence


Sequence ID>C09103621
Genome IDCP001287
Search identical group
Phylum/ClassCyanobacteriota
SpeciesRippkaea orientalis PCC 8801 [CP001287]
Start position on genome 3235276
End posion on genome 3235349
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agctatgtta
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA
TCCTGTCATCCCGAttt
Downstream region at tRNA end position 
atattgatgt
Secondary structure (Cloverleaf model)
>C09103621	Pro	TGG
                   a      Attt atattgatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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