The detailed information of tRNA gene sequence


Sequence ID>C09103718
Genome IDCP001087
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulforapulum autotrophicum HRM2 [CP001087]
Start position on genome 3994764
End posion on genome 3994840
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cctgttttat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCACTTGTCTGGGGGACAAGTGGTCGCAAGTTCAAA
TCTTGCCGTCCCGACCA
Downstream region at tRNA end position 
tttaaaatca
Secondary structure (Cloverleaf model)
>C09103718	Pro	GGG
                   t      ACCA tttaaaatca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T T C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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