The detailed information of tRNA gene sequence


Sequence ID>C09107620
Genome IDCP001510
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens AM1 [CP001510]
Start position on genome 5096201
End posion on genome 5096277
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gtaagggcgt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCCGGTAGCGCACCTGTCTGGGGGACAGGGGGTCGTCGGTTCAAG
TCCGGCCACTCCGACCA
Downstream region at tRNA end position 
tttcttttcg
Secondary structure (Cloverleaf model)
>C09107620	Pro	GGG
                   t      ACCA tttcttttcg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C G G C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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