The detailed information of tRNA gene sequence


Sequence ID>C09108095
Genome IDCP001431
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNeorickettsia risticii str. Illinois [CP001431]
Start position on genome 493086
End posion on genome 493161
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagctgtgtg
tRNA gene sequence 
CGGAGTGTAGCACAGCCTGGTTAGTGTGCTTGGTTTGGGACCAAGAGGTCGGGGGTTCGA
ATCCCTCCACTCCGACac
Downstream region at tRNA end position 
ttttctgcat
Secondary structure (Cloverleaf model)
>C09108095	Pro	TGG
                   g      ACac ttttctgcat
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C C G A        A      | + | | |     G
  T         C A C G       G G G G G     C
  G         | | | +                 T T
  G         G T G T
    T T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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