The detailed information of tRNA gene sequence


Sequence ID>C09110446
Genome IDCP001185
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho africanus TCF52B [CP001185]
Start position on genome 354608
End posion on genome 354684
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctctgaaatt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTGGCTAGCGCGCCTGTCTTGGGAACAGGAGGCCGCTGGTTCGAG
TCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
tatgcgggtg
Secondary structure (Cloverleaf model)
>C09110446	Pro	TGG
                   t      ACCA tatgcgggtg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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