The detailed information of tRNA gene sequence


Sequence ID>C09111136
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 891914
End posion on genome 891838
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaagaaaat
tRNA gene sequence 
CCGTGTTTGGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
CCCTGCAACACGGACCA
Downstream region at tRNA end position 
acacaagagc
Secondary structure (Cloverleaf model)
>C09111136	Pro	TGG
                   t      ACCA acacaagagc
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A
                     T - A          C A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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