The detailed information of tRNA gene sequence


Sequence ID>C09102616
Genome IDCP001226
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola Dsem [CP001226]
Start position on genome 31634
End posion on genome 31707
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttggtttgcA
tRNA gene sequence 
GGCTTCGTGGTATAGGGGTTATTACTTGGGACTGCAAATCCTCAAGCCTCAGTTCGAGTC
TGAGCGAAGCCTAgg
Downstream region at tRNA end position 
tgtatagcag
Secondary structure (Cloverleaf model)
>C09102616	Cys	GCA
                   A      TAgg tgtatagcag
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C          T G
                    T     G A G T C     A
      G G A        G      | | | | |     G
    G       T A T G       C T C A G     C
    G         | | |                 T T
    T       T T A C
      T A          T     AAGC
                    T   C
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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