The detailed information of tRNA gene sequence


Sequence ID>C09200011
Genome IDCP001279
Search identical group
Phylum/ClassCampylobacterota
SpeciesNautilia profundicola AmH [CP001279]
Start position on genome 1239589
End posion on genome 1239495
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attcctattt
tRNA gene sequence 
GGAGGGGATGTGATCCTGGTGGACACCCCGGGCTTCAAACCCGGTGGGGCGGCAGGTGAC
TGTCTGCCCGGAAGGTTCGATTCCTTCCCCCTTCCgcc
Downstream region at tRNA end position 
attttttata
Secondary structure (Cloverleaf model)
>C09200011	SeC	TCA
                   t      Cgcc attttttata
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    A     C T T C C     A
      C C T        T      | | | | |     G
    T       A G T G       G A A G G     C
    G         | | |                 T T
    G       A C A C
      T G G        C     TGGGGCGGCAGGTGACTGTCTGCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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