The detailed information of tRNA gene sequence


Sequence ID>C09100032
Genome IDCP001607
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter aphrophilus NJ8700 [CP001607]
Start position on genome 1942573
End posion on genome 1942479
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttccaaaa
tRNA gene sequence 
GGAAGATCGTCGTTTCCGGTGAGGCGGCAGGACTTCAAATCCTGTTGAGGCTGCCAGCAG
TCTCGGGTAGGTTCAACTCCTACGATCTTCCGCCA
Downstream region at tRNA end position 
gtaaatcctt
Secondary structure (Cloverleaf model)
>C09100032	SeC	TCA
                   a      GCCA gtaaatcctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     C A T C C     A
      C C T        T      | | | | |     A
    G       T T G C       G T A G G     C
    G       + + | |                 T T
    T       G G C G
      G A          G     TTGAGGCTGCCAGCAGTCTCGG
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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