The detailed information of tRNA gene sequence


Sequence ID>C09103451
Genome IDCP001145
Search identical group
Phylum/ClassCoprothermobacterota
SpeciesCoprothermobacter proteolyticus DSM 5265 [CP001145]
Start position on genome 209291
End posion on genome 209196
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taatgaatgt
tRNA gene sequence 
GGGAGCAGAAGGGTGCTGGTGTGCCTGCCGGACTTCAAATCCGGTTCCTCGTCCAAAAAG
GCGAGGGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position 
aaaatgatac
Secondary structure (Cloverleaf model)
>C09103451	SeC	TCA
                   t      GCCA aaaatgatac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        A      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G T          G     TTCCTCGTCCAAAAAGGCGAGGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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