The detailed information of tRNA gene sequence


Sequence ID>C09107067
Genome IDCP001154
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesLaribacter hongkongensis HLHK9 [CP001154]
Start position on genome 1908535
End posion on genome 1908440
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gccttggcat
tRNA gene sequence 
GGCAGGAAATCACTCCCGGTGGGGTGGCCGGTCTTCAAAACCGGATTGGGGGCGCCAGCG
CTCCCTGGCAGGTTCGACTCCTGTTTTCTGCCGCCA
Downstream region at tRNA end position 
ttcatggaat
Secondary structure (Cloverleaf model)
>C09107067	SeC	TCA
                   t      GCCA ttcatggaat
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     A - T
                     A - T          T C
                    A     T G T C C     A
      C C C        T      + | | | |     G
    G       T C A C       G C A G G     C
    G       + | | |                 T T
    T       G G T G
      G G          G     ATTGGGGGCGCCAGCGCTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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