The detailed information of tRNA gene sequence


Sequence ID>C09300160
Genome IDCP001275
Search identical group
Phylum/ClassThermomicrobiota
SpeciesThermomicrobium roseum DSM 5159 [CP001275]
Start position on genome 877433
End posion on genome 877529
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acttagttgc
tRNA gene sequence 
GAGGGCGGATCGGGCCCGGTGGCCTGCACGGTCTTCAAAACCGGTGGGCGGGGTGACGAG
CCTCGCCGGTGGGTTCGACTCCCATGCGCCCTCGCCA
Downstream region at tRNA end position 
gcgtcacccg
Secondary structure (Cloverleaf model)
>C09300160	SeC	TCA
                   c      GCCA gcgtcacccg
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       G G G C       G T G G G     C
    G       | | + |                 T T
    T       C C T G
      G G          C     TGGGCGGGGTGACGAGCCTCGCCG
                    A   G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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