The detailed information of tRNA gene sequence


Sequence ID>C09100392
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1033890
End posion on genome 1033800
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cattttttct
tRNA gene sequence 
GGAGATTTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAATCGCCGGGCGCCTCTGGCGT
TCCCTGGGTTCGAATCCCAGAGTCTCCGCCA
Downstream region at tRNA end position 
aacaggatag
Secondary structure (Cloverleaf model)
>C09100392	Ser	TGA
                   t      GCCA aacaggatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     T - A          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGGGCGCCTCTGGCGTTCC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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