The detailed information of tRNA gene sequence


Sequence ID>C09100395
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1033480
End posion on genome 1033391
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taccccattt
tRNA gene sequence 
GGAGCGTTGCCAGAGAGGCCTATTGGCGCTGCTTGGAAAGCAGATGGTCGGGCAACCGGC
ACGAAGGTTCGAATCCTTCACGCTCCGCCA
Downstream region at tRNA end position 
aactcagtaa
Secondary structure (Cloverleaf model)
>C09100395	Ser	GGA
                   t      GCCA aactcagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      A G A        G      | | | | |     G
    G       G A C C       G A A G G     C
    G       + | | |                 T T
    C       T T G G
      C T A        C     TGGTCGGGCAACCGGCAC
                    G   A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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