The detailed information of tRNA gene sequence


Sequence ID>C09100397
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1033001
End posion on genome 1032910
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcaccaaaaa
tRNA gene sequence 
GGAAATGTGGCAGAGCATGGTTGATTGCGCCGCCCTCGAAAAGCGGAGGCTGTGAAAACG
GCCCGCAGGTTCGAATCCTGCCATTTCCGCCA
Downstream region at tRNA end position 
atttgtgtgt
Secondary structure (Cloverleaf model)
>C09100397	Ser	CGA
                   a      GCCA atttgtgtgt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C G T C C     A
    A C G A        G      | | | | |     G
  T         G A C G       G C A G G     C
  G         + | | |                 T T
  G         T T G C
    T T G A        G     AGGCTGTGAAAACGGCCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C   A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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