The detailed information of tRNA gene sequence


Sequence ID>C09103209
Genome IDCP001364
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus aurantiacus [CP001364]
Start position on genome 1320763
End posion on genome 1320852
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaacagttat
tRNA gene sequence 
GGGGAGGTCGCATAGTGGCCTAGTGCGGCGGTTTGCTAAACCGCTAGGGGGGCAACCCCC
TCGAGGGTTCGAATCCCTCCCTCCCCGCCA
Downstream region at tRNA end position 
ggtcgcaccc
Secondary structure (Cloverleaf model)
>C09103209	Ser	GCT
                   t      GCCA ggtcgcaccc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAGGGGGGCAACCCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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