The detailed information of tRNA gene sequence


Sequence ID>C09103714
Genome IDCP001087
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulforapulum autotrophicum HRM2 [CP001087]
Start position on genome 3574698
End posion on genome 3574789
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtttaaac
tRNA gene sequence 
GGAGAAATGGCCGAGTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATAGGGGTAAAACTC
TATCGAGAGTTCGAATCTCTCTTTCTCCGCCA
Downstream region at tRNA end position 
gttttaaaag
Secondary structure (Cloverleaf model)
>C09103714	Ser	GCT
                   c      GCCA gttttaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGGTAAAACTCTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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