The detailed information of tRNA gene sequence


Sequence ID>C09103745
Genome IDCP001087
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulforapulum autotrophicum HRM2 [CP001087]
Start position on genome 1893877
End posion on genome 1893788
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgttactgc
tRNA gene sequence 
GGAGAGATGACCGAGTGGCTGAAGGTGCACGCCTGGAAAGCGTGTGTACTGTTACAGGTA
CCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tccctttttt
Secondary structure (Cloverleaf model)
>C09103745	Ser	GGA
                   c      GCCA tccctttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G A G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGTACTGTTACAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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