The detailed information of tRNA gene sequence


Sequence ID>C09106568
Genome IDCP001678
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHirschia baltica ATCC 49814 [CP001678]
Start position on genome 1618841
End posion on genome 1618752
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcttgatcga
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGAGAGATCGTA
TCGAGGGTTCGAATCCCTTCCTCTCCTCCA
Downstream region at tRNA end position 
gtcacacacc
Secondary structure (Cloverleaf model)
>C09106568	Ser	GCT
                   a      TCCA gtcacacacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGAGAGATCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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