The detailed information of tRNA gene sequence


Sequence ID>W1910888704
Genome IDNESA01000008
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesLimnohabitans sp. JirII-31 [NESA]
Start position on genome 179703
End posion on genome 179630
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgtcaatat
tRNA gene sequence 
AGGGGCGTAGCTTAGTGGTAAAGTAGCGGTTTCCAAAACCGTCGATGGGGGTTCGATTCC
CTCCGCCCCTGCCA
Downstream region at tRNA end position 
cgcagcgttg
Secondary structure (Cloverleaf model)
>W1910888704	Trp	CCA
                   t      GCCA cgcagcgttg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     T T C G       G G G G G     C
      G     | | | +                 T T
      G     A A G T
        T A        A     CGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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