The detailed information of tRNA gene sequence


Sequence ID>C09107114
Genome IDFM242711
Search identical group
Phylum/ClassBacillota
SpeciesListeria monocytogenes serotype 4b str. CLIP 80459 Clip80459 [FM242711]
Start position on genome 2408083
End posion on genome 2407993
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccattttcT
tRNA gene sequence 
GGAGAGCTGTCCGAGTGGCCGAAGGAGCACGGTTGGAAACCGTGTAGGCGGTGTAAGCTG
TCTCAAGGGTTCGAATCCCTTGCTCTCCGTtt
Downstream region at tRNA end position 
acacataata
Secondary structure (Cloverleaf model)
>C09107114	Ser	GGA
                   T      GTtt acacataata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGGTGTAAGCTGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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