The detailed information of tRNA gene sequence


Sequence ID>W1910890607
Genome IDNEVJ01000003
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella genomosp. 9 9 AU21707 [NEVJ]
Start position on genome 1748907
End posion on genome 1749001
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tagcgcttcc
tRNA gene sequence 
GGAAGGCATCCGTACCCGGTGGTGCGGCCGGGCTTCAAACCCGGTTGGGGACGTCAGACG
TTCCCACGTAGGTTCGACTCCTGCTGCCTTCCGCCc
Downstream region at tRNA end position 
ggtctcccag
Secondary structure (Cloverleaf model)
>W1910890607	Sec	TCA
                   c      GCCc ggtctcccag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C C        C      | + | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G G          G     TTGGGGACGTCAGACGTTCCCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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