The detailed information of tRNA gene sequence


Sequence ID>C09107461
Genome IDCP001298
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens CM4 [CP001298]
Start position on genome 297117
End posion on genome 297028
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acacctctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCACCGCACTCGAAATGCGGCATGGGTGCAAGCCCA
TCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
aggcgccttg
Secondary structure (Cloverleaf model)
>C09107461	Ser	CGA
                   c      GCCA aggcgccttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CATGGGTGCAAGCCCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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