The detailed information of tRNA gene sequence


Sequence ID>W1910899152
Genome IDNGJK01000026
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaera stadtmanae PA5 [NGJK]
Start position on genome 4758
End posion on genome 4842
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttatgtat
tRNA gene sequence 
GTCGAGGTGGCCCAGCCTGGTACGGCGGTGGCCTGCTAAGCCACTGGACAGATGTCCACC
CGGGTTCGAATCCCGGCCTCGGCGCtt
Downstream region at tRNA end position 
aattaatttt
Secondary structure (Cloverleaf model)
>W1910899152	Ser	GCT
                   t      GCtt aattaatttt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    C       C C C G       C C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGGACAGATGTCCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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