The detailed information of tRNA gene sequence


Sequence ID>W1910899161
Genome IDNGJK01000082
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaera stadtmanae PA5 [NGJK]
Start position on genome 21787
End posion on genome 21704
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttttagag
tRNA gene sequence 
GCCGAGATAGCCTAGCCAGGTAAGGCGCGGGACTTGAGATCCCGTGGAGTTATCTCCTCA
TGGGTTCAAATCCCATTCTCGGCGtaa
Downstream region at tRNA end position 
actttatttt
Secondary structure (Cloverleaf model)
>W1910899161	Ser	TGA
                   g      Gtaa actttatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T A C C C     A
      C G A        A      | | | | |     A
    C       T C C G       A T G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TGGAGTTATCTCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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