The detailed information of tRNA gene sequence


Sequence ID>W1910899169
Genome IDNGJK01000093
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaera stadtmanae PA5 [NGJK]
Start position on genome 42204
End posion on genome 42129
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attaatatat
tRNA gene sequence 
GGGCCTGTAGCCTAGACTGGATAGGGCGTTGGACTTCTAATCCAAAGGCCGGGGGTTCAA
ATCCCCCCAGGTCCGCta
Downstream region at tRNA end position 
tcttttatac
Secondary structure (Cloverleaf model)
>W1910899169	Arg	TCT
                   t      GCta tcttttatac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
    C A G A        A      | | | | |     A
  T         T C C G       G G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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