The detailed information of tRNA gene sequence


Sequence ID>C09108606
Genome IDCP001230
Search identical group
Phylum/ClassAquificota
SpeciesPersephonella marina EX-H1 [CP001230]
Start position on genome 1631155
End posion on genome 1631063
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagcctcaac
tRNA gene sequence 
GGATGGGTGCCCGAGCCTGGCCGAAGGGGCAGCACTGGAAATGCTGTGTACCGCTTTGCG
GTACCGAGGGTTCGAATCCCTCCCCATCCGCCA
Downstream region at tRNA end position 
gtgttaaaaa
Secondary structure (Cloverleaf model)
>C09108606	Ser	GGA
                   c      GCCA gtgttaaaaa
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     G
  T         G C C C       G A G G G     C
  G           | | |                 T T
  G         A G G G
    C C G A        G     TGTACCGCTTTGCGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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