The detailed information of tRNA gene sequence


Sequence ID>C09108689
Genome IDCP000613
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodospirillum centenum SW SW; ATCC 51521 [CP000613]
Start position on genome 1582949
End posion on genome 1582860
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcggcgatgc
tRNA gene sequence 
GGAGAGGTGGCGGAGTGGTCGAACGCGTCGGTCTCGAAAACCGAAGTACCCGCAAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctcctctcac
Secondary structure (Cloverleaf model)
>C09108689	Ser	CGA
                   c      GCCA ctcctctcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      C G A        G     AGTACCCGCAAGGGTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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