The detailed information of tRNA gene sequence


Sequence ID>W1910912310
Genome IDNHPE01000042
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum sp. Eb13 [NHPE]
Start position on genome 4918
End posion on genome 4846
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttagacgcgc
tRNA gene sequence 
GCCGGGGTAGCTCAGCTGGCAGAGCGATTCCTTCGTAAGGAATAGGTCGGGGGTTCAAAT
CCCTCCTCCGGCTtcg
Downstream region at tRNA end position 
agaataacgg
Secondary structure (Cloverleaf model)
>W1910912310	Thr	CGT
                   c      Ttcg agaataacgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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