The detailed information of tRNA gene sequence


Sequence ID>W1910912510
Genome IDNHPJ01000081
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum halodurans Cb34 [NHPJ]
Start position on genome 5901
End posion on genome 5829
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cggcacgcac
tRNA gene sequence 
GGGCCCCTAGCTCAACGGTAGAGCAGCCGCTTCGCAAGCGGCAAGCTCCGGGTTCAAATC
CCGGGGGTGTCCAtc
Downstream region at tRNA end position 
ccgtctcacc
Secondary structure (Cloverleaf model)
>W1910912510	Ala	CGC
                   c      CAtc ccgtctcacc
                     G - C
                     G + T
                     G   G
                     C   T
                     C - G
                     C - G
                     C - G          T A
                    T     G G C C C     A
        A A        A      | | | | |     A
      C     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AAGCT
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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